PlantRegMap: charting functional regulatory maps in plants
Peking University · Center for Life Sciences · +1 more institution
Abstract
With the goal of charting plant transcriptional regulatory maps (i.e. transcription factors (TFs), cis-elements and interactions between them), we have upgraded the TF-centred database PlantTFDB (http://planttfdb.cbi.pku.edu.cn/) to a plant regulatory data and analysis platform PlantRegMap (http://plantregmap.cbi.pku.edu.cn/) over the past three years. In this version, we updated the annotations for the previously collected TFs and set up a new section, 'extended TF repertoires' (TFext), to allow users prompt access to the TF repertoires of newly sequenced species. In addition to our regular TF updates, we are dedicated to updating the data on cis-elements and functional interactions between TFs and…
Citation impact
- FWCI
- 114.73
- Percentile
- 100%
- References
- 44
Authors
5- FTFeng TianCorresponding
Peking University, Center for Life Sciences, Beijing Advanced Sciences and Innovation Center
- DYDe-Chang Yang
Peking University, Beijing Advanced Sciences and Innovation Center
- YMYu-Qi Meng
Peking University, Beijing Advanced Sciences and Innovation Center
- JJJinpu Jin
Peking University, Beijing Advanced Sciences and Innovation Center
- GGGe Gao
Peking University, Beijing Advanced Sciences and Innovation Center
Topics & keywords
- Biology
- Regulatory sequence
- Computational biology
- Genome
- Transcription factor
- Cis-regulatory module
- Set (abstract data type)
- DNA binding site
- Life in Land