articleAnnual Review of Physical ChemistryFeb 24, 2020GREEN OA

Machine Learning for Molecular Simulation

FNFrank NoéATAlexandre TkatchenkoKMKlaus-Robert MüllerCCCecilia Clementi

Center for Theoretical Biological Physics · Rice University · +5 more institutions

PubMed
Indexed inarxivcrossrefpubmed

Abstract

Machine learning (ML) is transforming all areas of science. The complex and time-consuming calculations in molecular simulations are particularly suitable for an ML revolution and have already been profoundly affected by the application of existing ML methods. Here we review recent ML methods for molecular simulation, with particular focus on (deep) neural networks for the prediction of quantum-mechanical energies and forces, on coarse-grained molecular dynamics, on the extraction of free energy surfaces and kinetics, and on generative network approaches to sample molecular equilibrium structures and compute thermodynamics. To explain these methods and illustrate open methodological problems, we review some…

Citation impact

878
total citations
FWCI
39.01
Percentile
100%
References
128
Citations per year

Authors

4
  • FN
    Frank NoéCorresponding

    Center for Theoretical Biological Physics, Rice University, Freie Universität Berlin

  • AT
    Alexandre Tkatchenko

    University of Luxembourg

  • KM
    Klaus-Robert Müller

    Korea University, Max Planck Institute for Informatics, Technische Universität Berlin

  • CC
    Cecilia Clementi

    Center for Theoretical Biological Physics, Rice University, Freie Universität Berlin

Topics & keywords

Keywords
  • Artificial neural network
  • Generative grammar
  • Focus (optics)
  • Interface (matter)
  • Molecular dynamics
  • Energy (signal processing)
  • Molecular binding
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Funding