VolcaNoseR is a web app for creating, exploring, labeling and sharing volcano plots
Netherlands Cancer Institute-Antoni van Leeuwenhoek Hospital · University of Amsterdam · +1 more institution
Abstract
Comparative genome- and proteome-wide screens yield large amounts of data. To efficiently present such datasets and to simplify the identification of hits, the results are often presented in a type of scatterplot known as a volcano plot, which shows a measure of effect size versus a measure of significance. The data points with the largest effect size and a statistical significance beyond a user-defined threshold are considered as hits. Such hits are usually annotated in the plot by a label with their name. Volcano plots can represent ten thousands of data points, of which typically only a handful is annotated. The information of data that is not annotated is hardly or not accessible. To simplify access to the…
Citation impact
- FWCI
- 34.42
- Percentile
- 100%
- References
- 15
Authors
2Topics & keywords
- Plot (graphics)
- Computer science
- Web application
- Measure (data warehouse)
- Data mining
- Identification (biology)
- Information retrieval
- World Wide Web