The Gene Ontology resource: enriching a GOld mine
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Abstract
The Gene Ontology Consortium (GOC) provides the most comprehensive resource currently available for computable knowledge regarding the functions of genes and gene products. Here, we report the advances of the consortium over the past two years. The new GO-CAM annotation framework was notably improved, and we formalized the model with a computational schema to check and validate the rapidly increasing repository of 2838 GO-CAMs. In addition, we describe the impacts of several collaborations to refine GO and report a 10% increase in the number of GO annotations, a 25% increase in annotated gene products, and over 9,400 new scientific articles annotated. As the project matures, we continue our efforts to review…
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Authors
181Topics & keywords
Topics
Keywords
- Annotation
- Traceability
- Documentation
- Resource (disambiguation)
- Ontology
- Consistency (knowledge bases)
- Computer science
- Gene Annotation
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Funding
- NSNational Science FoundationAwards: IOS #1127112, 1565146, P20GM103446, 1458400, 1340112
- WTWellcome TrustAwards: 108433/Z/15/Z, 212925/Z/18/Z, 104967/Z/14/Z
- EMEuropean Molecular Biology LaboratoryAwards: OTAR02-048, OTAR-044
- AGAustralian Government
- ARAlzheimer’s Research UKAward: ARUK-NAS2017A-1
- NFNorges ForskningsrådAward: 247727
- NINational Institutes of HealthAwards: U01GM120953, R01GM080646, HG002659, U41HG002273, HG010859, U41HG007822, GM089636, U24HG007822, P20GM103446, ARUK-NAS2017A-1, U41 HG02273
- DFDirectorate for Biological SciencesAwards: 1340112, 1127112
- MRMedical Research CouncilAwards: MR/S000453/1, MR/N030117/1, MR/N030117/1, MR/S000453/1
- BABiotechnology and Biological Sciences Research CouncilAwards: BB/L024136/1, BB/M011674/1, BB/N00521X/1, BB/N019172/1, BB/L024136/1, BB/P024610, BB/N019172/1, BB/P024602, BB/N00521X/1, BB/M011674/1
- SFStaatssekretariat für Bildung, Forschung und Innovation
- NHNational Heart, Lung, and Blood InstituteAward: HL 64541
- NINational Institute of Mental HealthAward: U24HG007822
- NHNational Human Genome Research InstituteAwards: U41HG002273, HG010859, U24-HG002223, HG 002273, HG002659, U41 HG02273, U41 HG001315, HG 000330, U24 HG002223, U41HG007822, U41HG000739, HG 003751
- NENational Eye Institute
- NINational Institute of General Medical SciencesAwards: U41HG007822, 1R24GM137770-01, U24HG007822, U01GM120953, R01GM080646, P20GM103446
- NINational Institute of Allergy and Infectious DiseasesAward: U24HG007822
- NINational Institute of Diabetes and Digestive and Kidney DiseasesAward: U24HG007822