SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets
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Abstract
Combinatorial therapies have been recently proposed to improve the efficacy of anticancer treatment. The SynergyFinder R package is a software used to analyze pre-clinical drug combination datasets. Here, we report the major updates to the SynergyFinder R package for improved interpretation and annotation of drug combination screening results. Unlike the existing implementations, the updated SynergyFinder R package includes five main innovations. 1) We extend the mathematical models to higher-order drug combination data analysis and implement dimension reduction techniques for visualizing the synergy landscape. 2) We provide a statistical analysis of drug combination synergy and sensitivity with confidence…
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Keywords
- Annotation
- Interpretation (philosophy)
- Computer science
- Drug
- Computational biology
- Natural language processing
- Artificial intelligence
- Information retrieval
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