articleGenomics Proteomics & BioinformaticsJan 24, 2022GOLD OA

SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets

University of Helsinki

PubMed
Indexed incrossrefdoajpubmed

Abstract

Combinatorial therapies have been recently proposed to improve the efficacy of anticancer treatment. The SynergyFinder R package is a software used to analyze pre-clinical drug combination datasets. Here, we report the major updates to the SynergyFinder R package for improved interpretation and annotation of drug combination screening results. Unlike the existing implementations, the updated SynergyFinder R package includes five main innovations. 1) We extend the mathematical models to higher-order drug combination data analysis and implement dimension reduction techniques for visualizing the synergy landscape. 2) We provide a statistical analysis of drug combination synergy and sensitivity with confidence…

Citation impact

667
total citations
FWCI
88.11
Percentile
100%
References
54
Citations per year

Authors

8

Topics & keywords

Keywords
  • Annotation
  • Interpretation (philosophy)
  • Computer science
  • Drug
  • Computational biology
  • Natural language processing
  • Artificial intelligence
  • Information retrieval
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