The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

Community, The Galaxy; Afgan, Enis; Nekrutenko, Anton; Grüning, Björn; Blankenberg, Daniel; Goecks, Jeremy; Schatz, Michael C.; Ostrovsky, Alexander; Mahmoud, Alexandru; Lonie, Andrew; Syme, Anna; Fouilloux, Anne; Bretaudeau, Anthony; Nekrutenko, Anton; Kumar, Anup; Eschenlauer, Arthur C.; DeSanto, Assunta D; Guerler, Aysam; Serrano‐Solano, Beatriz; Batut, Bérénice; Grüning, Björn; Langhorst, Bradley W.; Carr, Bridget; Raubenolt, Bryan; Hyde, Cameron; Bromhead, Catherine; Barnett, Christopher B.; Royaux, Coline; Gallardo, Cristóbal; Blankenberg, Daniel; Fornika, Daniel; Baker, Dannon; Bouvier, Dave; Clements, Dave; Morais, David Anderson de Lima; Tabernero, David López; Larivière, Delphine; Nasr, Engy; Afgan, Enis; Zambelli, Federico; Heyl, Florian; Psomopoulos, Fotis; Coppens, Frederik; Price, Gareth; Cuccuru, Gianmauro; Corguillé, Gildas Le; Kuster, Greg Von; Akbulut, Gulsum Gudukbay; Rasche, Helena; Hotz, Hans-Rudolf; Eguinoa, Ignacio; Makunin, Igor V.; Ranawaka, Isuru; Taylor, James; Joshi, Jayadev; Hillman‐Jackson, Jennifer; Goecks, Jeremy; Chilton, John; Kamali, Kaivan; Suderman, Keith; Poterlowicz, Krzysztof; Yvan, Le Bras; Lopez‐Delisle, Lucille; Sargent, Luke; Bassetti, Madeline E.; Tangaro, M. A.; Beek, Marius van den; Čech, Martin; Bernt, Matthias; Fahrner, Matthias; Tekman, Mehmet; Föll, Melanie Christine; Schatz, Michael C.; Crusoe, Michael R.; Roncoroni, Miguel; Kucher, Natalie; Coraor, Nate; Stoler, Nicholas; Rhodes, Nick; Soranzo, Nicola; Pinter, Niko; Goonasekera, Nuwan; Moreno, Pablo; Videm, Pavankumar; Melanie, Petera; Mandreoli, Pietro; Jagtap, Pratik; Gu, Qiang; Weber, Ralf J. M.; Lazarus, Ross; Vorderman, Ruben H.P.; Hiltemann, Saskia; Golitsynskiy, Sergey; Garg, Shilpa; Bray, Simon; Gladman, Simon; Leo, Simone; Mehta, Subina; Griffin, Timothy J.; Jalili, Vahid; Vandenbrouck, Yves; Wen, Victor; NAGAMPALLI, VIJAY; Bacon, Wendi; Koning, Willem de; Maier, Wolfgang; Briggs, Peter J.

doi:10.1093/nar/gkac247

articleNucleic Acids ResearchApr 14, 2022GOLD OA

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

TGThe Galaxy CommunityEAEnis AfganANAnton NekrutenkoBGBjörn Grüning DBDaniel Blankenberg

Johns Hopkins University · Pennsylvania State University · +14 more institutions

PubMed

Indexed incrossrefdoajpubmed

Abstract

Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute to the project, with support from multiple national infrastructure providers that enable freely accessible analysis and training services. The Galaxy Training Network supports free, self-directed, virtual training with >230 integrated tutorials. Project engagement metrics have continued to grow over the last 2 years, including source code contributions, publications, software packages wrapped as tools, registered users and their daily analysis jobs, and new…

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1,353

total citations

FWCI: 555.54
Percentile: 100%
References: 24

Citations per year

Authors

107

TG
The Galaxy CommunityCorresponding
Johns Hopkins University
EA
Enis Afgan
Pennsylvania State University
AN
Anton Nekrutenko
University of Freiburg
BG
Björn Grüning
Cleveland Clinic
DB
Daniel Blankenberg
Moffitt Cancer Center

Topics & keywords

Topics

Keywords

Troubleshooting
Workbench
Workflow
Suite
Software
Computer science
Interface (matter)
World Wide Web

UN Sustainable Development Goals

Industry, innovation and infrastructure

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