preprintarXiv (Cornell University)Jul 12, 2024GREEN OA

Image segmentations produced by BAMF under the AIMI Annotations initiative

VOVan Oss, JeffMGMurugesan, Gowtham KrishnanMDMcCrumb, DianaSRSoni, Rahul
Indexed inarxivdatacite

Abstract

The Imaging Data Commons (IDC)(https://imaging.datacommons.cancer.gov/) [1] connects researchers with publicly available cancer imaging data, often linked with other types of cancer data. Many of the collections have limited annotations due to the expense and effort required to create these manually. The increased capabilities of AI analysis of radiology images provide an opportunity to augment existing IDC collections with new annotation data. To further this goal, we trained several nnUNet [2] based models for a variety of radiology segmentation tasks from public datasets and used them to generate segmentations for IDC collections. To validate the model's performance, roughly 10% of the AI predictions were…

Citation impact

369
total citations
FWCI
Percentile
References
2
Citations per year

Authors

4
  • VO
    Van Oss, JeffCorresponding
  • MG
    Murugesan, Gowtham Krishnan
  • MD
    McCrumb, Diana
  • SR
    Soni, Rahul

Topics & keywords

Keywords
  • Benchmarking
  • Medical physics
  • Brain tumor
  • Computer science
  • Benchmark (surveying)
  • Artificial intelligence
  • Medicine
  • Pathology
UN Sustainable Development Goals
  • Partnerships for the goals
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