CAMPR4: a database of natural and synthetic antimicrobial peptides
National Institute for Research in Reproductive Health
Abstract
There has been an exponential increase in the design of synthetic antimicrobial peptides (AMPs) for its use as novel antibiotics. Synthetic AMPs are substantially enriched in residues with physicochemical properties known to be critical for antimicrobial activity; such as positive charge, hydrophobicity, and higher alpha helical propensity. The current prediction algorithms for AMPs have been developed using AMP sequences from natural sources and hence do not perform well for synthetic peptides. In this version of CAMP database, along with updating sequence information of AMPs, we have created separate prediction algorithms for natural and synthetic AMPs. CAMPR4 holds 24243 AMP sequences, 933 structures, 2143…
Citation impact
- FWCI
- 27.31
- Percentile
- 100%
- References
- 67
Authors
8- UGUlka Gawde
National Institute for Research in Reproductive Health
- SCShuvechha Chakraborty
National Institute for Research in Reproductive Health
- FHFaiza Hanif Waghu
National Institute for Research in Reproductive Health
- RSRam Shankar Barai
National Institute for Research in Reproductive Health
- AKAshlesha Khanderkar
Topics & keywords
- Antimicrobial peptides
- Biology
- Sequence (biology)
- Peptide sequence
- Computational biology
- Antimicrobial
- Combinatorial chemistry
- Amino acid