The UCSC Genome Browser database: 2023 update
University of California, Santa Cruz · Helmholtz Zentrum München · +1 more institution
Abstract
The UCSC Genome Browser (https://genome.ucsc.edu) is an omics data consolidator, graphical viewer, and general bioinformatics resource that continues to serve the community as it enters its 23rd year. This year has seen an emphasis in clinical data, with new tracks and an expanded Recommended Track Sets feature on hg38 as well as the addition of a single cell track group. SARS-CoV-2 continues to remain a focus, with regular annotation updates to the browser and continued curation of our phylogenetic sequence placing tool, hgPhyloPlace, whose tree has now reached over 12M sequences. Our GenArk resource has also grown, offering over 2500 hubs and a system for users to request any absent assemblies. We have…
Citation impact
- FWCI
- 52.06
- Percentile
- 100%
- References
- 40
Authors
25Topics & keywords
- Genome browser
- Annotation
- Genome
- Biology
- Resource (disambiguation)
- Visualization
- World Wide Web
- Computer science
Funding
- HHHoward Hughes Medical InstituteAward: 090100
- BWBurroughs Wellcome FundAward: 1021635
- SVSilicon Valley Community FoundationAward: 2017-171531(5022)
- CDCalifornia Department of Public HealthAwards: 20-11088, 75D30121C11554
- DFDeutsche ForschungsgemeinschaftAward: NFDI 1/1
- CFCenters for Disease Control and Prevention
- OOOffice of the President, University of CaliforniaAward: R01RG3764
- NHNational Human Genome Research InstituteAwards: 2U24HG007234, 5R01HG010329, 5U41HG010972, 5U01HG010971, 2U24HG002371
- NINational Institute of Allergy and Infectious DiseasesAward: 75N93019C00076