Federated learning enables big data for rare cancer boundary detection
Technical University of Munich · University of Pennsylvania · +110 more institutions
Abstract
Although machine learning (ML) has shown promise across disciplines, out-of-sample generalizability is concerning. This is currently addressed by sharing multi-site data, but such centralization is challenging/infeasible to scale due to various limitations. Federated ML (FL) provides an alternative paradigm for accurate and generalizable ML, by only sharing numerical model updates. Here we present the largest FL study to-date, involving data from 71 sites across 6 continents, to generate an automatic tumor boundary detector for the rare disease of glioblastoma, reporting the largest such dataset in the literature (n = 6, 314). We demonstrate a 33% delineation improvement for the surgically targetable tumor,…
Citation impact
- FWCI
- 44.21
- Percentile
- 100%
- References
- 113
Authors
279Topics & keywords
- Generalizability theory
- Computer science
- Glioblastoma
- Machine learning
- Data sharing
- Scale (ratio)
- Sample (material)
- Task (project management)
- Partnerships for the goals
Funding
- NSNational Science FoundationAwards: 2040462, 2040532
- UDU.S. Department of DefenseAwards: U10CA180820, R50CA211270, U10CA180794
- VFV Foundation for Cancer Research
- ICIntel Corporation
- BABrigham and Women's Hospital
- MGMassachusetts General Hospital
- RSRadiological Society of North AmericaAward: RR2011
- ACAmerican College of Radiology Imaging NetworkAwards: U10CA180820, CA079778, CA080098
- UOUniversity of Pennsylvania
- OSOhio State University
- VMVarian Medical Systems
- WUWashington University in St. Louis
- CICanadian Institute for Advanced Research
- JHJohns Hopkins University
- UOUniversity of Pittsburgh
- CWCase Western Reserve University
- TJThomas Jefferson University
- CCCase Comprehensive Cancer Center, Case Western Reserve University
- SOSchool of Medicine, Case Western Reserve University
- DKDeutsches Krebsforschungszentrum
- UOUniversity of Bern
- MCMoffitt Cancer Center
- AMAlberta Machine Intelligence Institute
- OSOhio State University Comprehensive Cancer Center – Arthur G. James Cancer Hospital and Richard J. Solove Research Institute
- URUK Research and Innovation
- IUInselspital, Universitätsspital Bern
- KUKepler Universitätsklinikum
- NINational Institute of Mental Health and Neurosciences
- ANAgenția Națională pentru Cercetare și Dezvoltare
- UOUniversity of Alberta
- CRCancer Research UKAward: C19942/A28832
- ICImperial College London
- UOUniversity of Oxford
- ECEuropean CommissionAwards: 316679, 757173, FP7-PEOPLE-2012-ITN
- DFDeutsche ForschungsgemeinschaftAwards: ID 404521405, Project-ID 404521405, SFB 1389, 404521405, Project-ID 404521405, 404521405, SFB 1389, SFB 1389, SFB 824
- SNSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungAwards: 203148, 140958
- FUFlinders University
- FDFundação de Amparo à Pesquisa do Estado de São PauloAwards: 2014/, 2014/12236-1
- FNFonds National de la Recherche Luxembourg
- MZMinisterstvo Zdravotnictví Ceské RepublikyAward: NU21-08-00359
- CNConselho Nacional de Desenvolvimento Científico e TecnológicoAwards: 2014/12236-1, 303808/2018-7
- KKKWF KankerbestrijdingAward: EMCR 2015-7859
- CUChinese University of Hong Kong
- TUTechnische Universität München
- CDCentre d'Imagerie BioMédicale
- UFUniversidade Federal do Paraná
- MUMasarykova Univerzita
- LFLékařská fakulta, Masarykova univerzita
- DKDeutschen Konsortium für Translationale Krebsforschung
- UHUniversitätsklinikum Heidelberg
- ANAgencia Nacional de Investigación y DesarrolloAwards: FB0008, FB210017
- NINational Institutes of HealthAwards: R37CA214955, R50CA211270, CA180794, NINDS:R01NS042645, NIH/NCI:U01CA242871, NCI:U01CA242871, U24CA189523, NIH/NCI:U24CA189523, U01CA242871, CA180820, NCI:U24CA189523, U10CA180820, UL1TR001433, P30CA51008, NCI:U24CA215109, R01NS042645, R01CA233888, CA180868, U10CA180794, U01CA248226, RSG-16-005-01
- UOUniversity of California, Los Angeles
- UOUniversity of Texas MD Anderson Cancer Center
- MCMedical Center, University of Pittsburgh
- PSPerelman School of Medicine, University of Pennsylvania
- AMAnschutz Medical Campus, University of Colorado
- WSWhiting School of Engineering, Johns Hopkins University
- NGNYU Grossman School of Medicine
- AAAthinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital
- MRMedical Research CouncilAwards: MR/W021684/1, 2096671, 2096671
- EAEngineering and Physical Sciences Research CouncilAward: 203148/ Z/16/Z
- NINational Institute of Mental Health
- NCNational Cancer InstituteAwards: U24CA215109, R01NS042645, CA180820, CA180822, CA180794, U10CA180820, U10CA21661, U10CA37422, CA080098, R01CA233888, U01CA248226, U24CA189523, P30CA51008, U01CA242871, R37CA214955, R01CA082500, U10CA180794, CA180868, CA079778
- NINational Institute of Neurological Disorders and StrokeAwards: R01NS042645, NINDS:R01NS042645, U01CA242871, U24CA189523
- NINational Institute of Biomedical Imaging and BioengineeringAwards: R01CA233888, R21EB030209
- NCNational Center for Advancing Translational SciencesAward: UL1TR001433
- DGDavid Geffen School of Medicine, University of California, Los Angeles
- FPFP7 People: Marie-Curie ActionsAward: 2012-ITN
- CCHIST-ERA
- DPDOD Peer Reviewed Cancer Research Program