Therapeutic targets for inflammatory bowel disease: proteome-wide Mendelian randomization and colocalization analyses
Karolinska Institutet · Second Affiliated Hospital of Zhejiang University · +6 more institutions
Abstract
Identifying new drug targets for inflammatory bowel disease (IBD) is urgently needed. The proteome is a major source of therapeutic targets. We conducted a proteome-wide Mendelian randomization (MR) and colocalization analyses to identify possible targets for IBD.
Summary-level data of 4907 circulating protein levels were extracted from a large-scale protein quantitative trait loci study including 35,559 individuals. Genetic associations with IBD and its subtypes were obtained from the Inflammatory Bowel Disease Genetics Consortium (25,024 cases and 34,915 controls), the FinnGen study (7206 cases and 253,199 controls), and the UK Biobank study (7045 cases and 449,282 controls). MR analysis was conducted to estimate the associations between protein and IBD risk. The colocalization analysis was used to examine whether the identified proteins and IBD shared casual variants.
Citation impact
- FWCI
- 60.08
- Percentile
- 100%
- References
- 40
Authors
12- JCJie ChenCorresponding
Karolinska Institutet, Second Affiliated Hospital of Zhejiang University
- FXFengzhe Xu
Westlake University
- XRXixian Ruan
Central South University, Third Xiangya Hospital
- JSJing Sun
Karolinska Institutet, Second Affiliated Hospital of Zhejiang University
- YZYao Zhang
Shanghai Jiao Tong University, Ruijin Hospital
Topics & keywords
- Inflammatory bowel disease
- Mendelian randomization
- PTPN22
- Genome-wide association study
- Colocalization
- Proteome
- Medicine
- Biology
Funding
- KPKey Project of Research and Development Plan of Hunan ProvinceAward: 2019SK2041
- NNNational Natural Science Foundation of ChinaAward: 81970494
- VVetenskapsrådetAwards: 2019-00977, 2018-00123, 2018-
- FOForskningsrådet om Hälsa, Arbetsliv och VälfärdAwards: 2019-00977, 2018-00123
- SFScience Fund for Distinguished Young Scholars of Zhejiang ProvinceAward: LR22H260001