antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
Novo Nordisk Foundation · Technical University of Denmark · +6 more institutions
Abstract
Microorganisms produce small bioactive compounds as part of their secondary or specialised metabolism. Often, such metabolites have antimicrobial, anticancer, antifungal, antiviral or other bio-activities and thus play an important role for applications in medicine and agriculture. In the past decade, genome mining has become a widely-used method to explore, access, and analyse the available biodiversity of these compounds. Since 2011, the 'antibiotics and secondary metabolite analysis shell-antiSMASH' (https://antismash.secondarymetabolites.org/) has supported researchers in their microbial genome mining tasks, both as a free to use web server and as a standalone tool under an OSI-approved open source…
Citation impact
- FWCI
- 415.14
- Percentile
- 100%
- References
- 42
Authors
13- KBKai Blin
Novo Nordisk Foundation, Technical University of Denmark
- SJSimon J. Shaw
Novo Nordisk Foundation, Technical University of Denmark
- HEHannah E. Augustijn
Leiden University, Wageningen University & Research
- ZLZachary L. Reitz
Wageningen University & Research
- FBFriederike Biermann
Goethe University Frankfurt, LOEWE Centre for Translational Biodiversity Genomics, Wageningen University & Research
Topics & keywords
- Biology
- Visualization
- Computational biology
- Data mining
- Computer science
- Zero hunger