reviewJournal of Translational MedicineMay 18, 2023GOLD OA

Advances in spatial transcriptomics and related data analysis strategies

Shanghai Jiao Tong University · Renji Hospital · +2 more institutions

PubMed
Indexed incrossrefdoajpubmed

Abstract

Spatial transcriptomics technologies developed in recent years can provide various information including tissue heterogeneity, which is fundamental in biological and medical research, and have been making significant breakthroughs. Single-cell RNA sequencing (scRNA-seq) cannot provide spatial information, while spatial transcriptomics technologies allow gene expression information to be obtained from intact tissue sections in the original physiological context at a spatial resolution. Various biological insights can be generated into tissue architecture and further the elucidation of the interaction between cells and the microenvironment. Thus, we can gain a general understanding of histogenesis processes and…

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