articleNucleic Acids ResearchNov 11, 2023GOLD OA

VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023

European Bioinformatics Institute · University of Liverpool · +6 more institutions

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Abstract

The Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB, https://veupathdb.org) is a Bioinformatics Resource Center funded by the National Institutes of Health with additional funding from the Wellcome Trust. VEuPathDB supports >600 organisms that comprise invertebrate vectors, eukaryotic pathogens (protists and fungi) and relevant free-living or non-pathogenic species or hosts. Since 2004, VEuPathDB has analyzed omics data from the public domain using contemporary bioinformatic workflows, including orthology predictions via OrthoMCL, and integrated the analysis results with analysis tools, visualizations, and advanced search capabilities. The unique data mining platform coupled with >3000…

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242
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100%
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Authors

61

Topics & keywords

Keywords
  • Biology
  • Workflow
  • Resource (disambiguation)
  • Host (biology)
  • Computational biology
  • Data science
  • Interface (matter)
  • Informatics
UN Sustainable Development Goals
  • Industry, innovation and infrastructure
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