The UCSC Genome Browser database: 2024 update
University of California, Santa Cruz · Helmholtz Zentrum München · +2 more institutions
Abstract
The UCSC Genome Browser (https://genome.ucsc.edu) is a web-based genomic visualization and analysis tool that serves data to over 7,000 distinct users per day worldwide. It provides annotation data on thousands of genome assemblies, ranging from human to SARS-CoV2. This year, we have introduced new data from the Human Pangenome Reference Consortium and on viral genomes including SARS-CoV2. We have added 1,200 new genomes to our GenArk genome system, increasing the overall diversity of our genomic representation. We have added support for nine new user-contributed track hubs to our public hub system. Additionally, we have released 29 new tracks on the human genome and 11 new tracks on the mouse genome.…
Citation impact
- FWCI
- 39.98
- Percentile
- 100%
- References
- 27
Authors
27Topics & keywords
- Genome browser
- Genome
- Biology
- Annotation
- Human genome
- Computational biology
- Genome project
- Genomics
- Partnerships for the goals
Funding
- SVSilicon Valley Community FoundationAward: CZIF2022-007487
- CDCalifornia Department of Public HealthAwards: 20- 11088, 20-11088, 75D30121C11554
- AGAustralian Government
- CFCenters for Disease Control and PreventionAward: 75D30121C11554
- SFStaatssekretariat für Bildung, Forschung und Innovation
- NINational Institute of Mental HealthAwards: RF1MH132662, U24MH132628
- NHNational Human Genome Research InstituteAwards: 2U24HG007234, 5R01HG010329, 5U41HG010972, 5U01HG010971, 2U24HG002371
- NINational Institute of Allergy and Infectious DiseasesAward: 75N93019C00076