datasetResearch Publications (Maastricht University)Apr 13, 2026GREEN OA

The LOTUS Initiative for Open Natural Products Research: frozen dataset union wikidata (with metadata)

University of Geneva · Institute for Systems Biology · +3 more institutions

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Abstract

Tabular CSV exports of the LOTUS Initiative (https://doi.org/10.7554/eLife.70780) data from https://www.wikidata.org. File Description {date_str}_frozen.csv.gz Core triplet table: each row is a unique (structure InChIKey, organism Wikidata QID, reference Wikidata QID) triple with organism name, reference DOI, and manual validation status. {date_str}_frozen_metadata.csv.gz Comprehensive metadata table: enriched with structural descriptors (InChI, SMILES, molecular formula, exact mass, stereocenters), chemical classifications (NPClassifier, ClassyFire), biological taxonomy (Open Tree of Life), PubChem compound properties, and literature references (DOI, PMID, PMCID). {date_str}_changes_report.txt Change report:…

Citation impact

4
total citations
FWCI
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0
Citations per year

Authors

3

Topics & keywords

Keywords
  • Metadata
  • Lotus
  • Computer science
  • Open source
  • World Wide Web
  • Natural (archaeology)
  • Information retrieval
  • Database
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