The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update

Community, The Galaxy; Abueg, Linelle Ann L; Afgan, Enis; Allart, Olivier; Awan, Ahmed; Bacon, Wendi; Baker, Dannon; Bassetti, Madeline E.; Batut, Bérénice; Bernt, Matthias; Blankenberg, Daniel; Bombarely, Aureliano; Bretaudeau, Anthony; Bromhead, Catherine; Burke, Melissa L.; Capon, Patrick K.; Čech, Martin; Chavero-Diez, María; Chilton, John; Collins, Tyler J; Coppens, Frederik; Coraor, Nate; Cuccuru, Gianmauro; Cumbo, Fabio; Davis, John; Geest, Paul F De; Koning, Willem de; Demko, Martin; DeSanto, Assunta D; Begines, José Manuel Domínguez; Doyle, Maria; Droesbeke, Bert; Erxleben-Eggenhofer, Anika; Föll, Melanie Christine; Formenti, Giulio; Fouilloux, Anne; Gangazhe, Rendani; Genthon, Tanguy; Goecks, Jeremy; Beltran, Alejandra N Gonzalez; Goonasekera, Nuwan; Goué, Nadia; Griffin, Timothy J.; Grüning, Björn; Guerler, Aysam; Gundersen, Sveinung; Gustafsson, Ove; Hall, Christina; Harrop, Thomas W.R.; Hecht, Helge; Heidari, Alireza; Heisner, Tillman; Heyl, Florian; Hiltemann, Saskia; Hotz, Hans-Rudolf; Hyde, Cameron; Jagtap, Pratik; Jakiela, Julia; Johnson, James E.; Joshi, Jayadev; Jossé, Marie; Jumah, Khaled; Kalaš, Matúš; Kamieniecka, Katarzyna; Kayikcioglu, Tunc; Konkol, Markus; Kostrykin, Leonid; Kucher, Natalie; Kumar, Anup; Kuntz, Mira; Larivière, Delphine; Lazarus, Ross; Bras, Yvan Le; Corguillé, Gildas Le; Lee, Justin; Leo, Simone; Liborio, Leandro; Libouban, Romane; Tabernero, David López; Lopez‐Delisle, Lucille; Los, Laila S; Mahmoud, Alexandru; Makunin, Igor V.; Marin, Pierre; Mehta, Subina; Mok, Winnie; Moreno, Pablo; Morier-Genoud, François Antoine; Mosher, Stephen; Müller, Teresa; Nasr, Engy; Nekrutenko, Anton; Nelson, Tiffanie M.; Oba, Asime J; Ostrovsky, Alexander; Polunina, Polina V; Poterlowicz, Krzysztof; Price, Elliott J.; Price, Gareth; Rasche, Helena; Raubenolt, Bryan; Royaux, Coline; Sargent, Luke; Savage, Michelle; Savchenko, V.; Savchenko, Denys; Schatz, Michael C.; Seguineau, Pauline; Serrano‐Solano, Beatriz; Soranzo, Nicola; Srikakulam, Sanjay Kumar; Suderman, Keith; Syme, Anna; Tangaro, M. A.; Tedds, Jonathan; Tekman, Mehmet; Thang, Wai Cheng; Thanki, Anil S.; Uhl, Michaël; Beek, Marius van den; Varshney, Deepti; Vessio, Jenn; Videm, Pavankumar; Kuster, Greg Von; Watson, Gregory R.; Whitaker-Allen, Natalie; Winter, Uwe; Wolstencroft, Martin; Zambelli, Federico; Zierep, Paul; Zoabi, Rand

doi:10.1093/nar/gkae410

articleNucleic Acids ResearchMay 20, 2024GOLD OA

The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update

TGThe Galaxy CommunityLALinelle Ann L Abueg EAEnis Afgan OAOlivier Allart AAAhmed Awan

Rockefeller University · Johns Hopkins University · +54 more institutions

PubMed

Indexed incrossrefdoajpubmed

Abstract

Galaxy (https://galaxyproject.org) is deployed globally, predominantly through free-to-use services, supporting user-driven research that broadens in scope each year. Users are attracted to public Galaxy services by platform stability, tool and reference dataset diversity, training, support and integration, which enables complex, reproducible, shareable data analysis. Applying the principles of user experience design (UXD), has driven improvements in accessibility, tool discoverability through Galaxy Labs/subdomains, and a redesigned Galaxy ToolShed. Galaxy tool capabilities are progressing in two strategic directions: integrating general purpose graphical processing units (GPGPU) access for cutting-edge…

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767

total citations

FWCI: 718.57
Percentile: 100%
References: 26

Citations per year

Authors

131

TG
The Galaxy CommunityCorresponding
Rockefeller University
LA
Linelle Ann L Abueg
Johns Hopkins University
EA
Enis Afgan
AARNet (Australia)
OA
Olivier Allart
Johns Hopkins University
AA
Ahmed Awan
The Open University

Topics & keywords

Topics

Keywords

Galaxy
Computer science
SPARQL
Galaxy merger
Galaxy formation and evolution
World Wide Web
RDF
Astrophysics

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