Stromal architecture and fibroblast subpopulations with opposing effects on outcomes in hepatocellular carcinoma
Fudan University · Zhongshan Hospital · +11 more institutions
Abstract
Dissecting the spatial heterogeneity of cancer-associated fibroblasts (CAFs) is vital for understanding tumor biology and therapeutic design. By combining pathological image analysis with spatial proteomics, we revealed two stromal archetypes in hepatocellular carcinoma (HCC) with different biological functions and extracellular matrix compositions. Using paired single-cell RNA and epigenomic sequencing with Stereo-seq, we revealed two fibroblast subsets CAF-FAP and CAF-C7, whose spatial enrichment strongly correlated with the two stromal archetypes and opposing patient prognosis. We discovered two functional units, one is the intratumor inflammatory hub featured by CAF-FAP plus CD8_PDCD1 proximity and the…
Citation impact
- FWCI
- 28.28
- Percentile
- 100%
- References
- 107
Authors
37- YCYifei Cheng
Fudan University, Zhongshan Hospital
- XCXiaofang Chen
BGI Group (China), Chinese Academy of Sciences, Zhejiang Cancer Hospital, University of Chinese Academy of Sciences
- FLFeng Li
Chinese Academy of Sciences, Center for Excellence in Brain Science and Intelligence Technology
- ZYZhicheng Yang
Chinese Academy of Sciences, Shanghai Institute of Materia Medica, University of Chinese Academy of Sciences
- LXLiyun Xiao
BGI Group (China), Chinese Academy of Sciences, Zhejiang Cancer Hospital
Topics & keywords
- Stromal cell
- Hepatocellular carcinoma
- Cancer-Associated Fibroblasts
- Cancer research
- Fibroblast
- Stroma
- Tumor microenvironment
- Extracellular matrix
- Good health and well-being
Funding
- NNNational Natural Science Foundation of ChinaAwards: 81961128025, 82172860, 82103037, 82394450, 82130077, 82090053, U23A6010, 82203643, 32370978
- MOMinistry of Science and Technology of the People's Republic of ChinaAwards: 2020YFA0509000, 2022YFA1302902
- SAScience and Technology Commission of Shanghai MunicipalityAwards: 22YF1407200, 20XD1424900, 19XD1420700, 2018SHZDZX05