article·Nature Biotechnology·Jul 16, 2025Closed access

Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper

BJBen J. WoodcroftCorresponding authorSTSamuel T. N. AroneyRZRossen ZhaoMAMitchell A. CunninghamJAJ. A. Mitchell

Translational Research Institute · Queensland University of Technology · +1 more institution

PubMed
Indexed incrossrefpubmed

Abstract

No abstract available for this paper.

Citation impact

59
total citations
FWCI
37.13
Percentile
100%
References
75
Citations per year

Authors

8
  • BJ
    Ben J. WoodcroftCorresponding

    Translational Research Institute

  • ST
    Samuel T. N. Aroney

    Translational Research Institute, Queensland University of Technology

  • RZ
    Rossen Zhao

    Translational Research Institute, Queensland University of Technology

  • MA
    Mitchell A. Cunningham

    The University of Melbourne

  • JA
    J. A. Mitchell

    Translational Research Institute, Queensland University of Technology

Topics & keywords

Topics
  • Primary topicGenomics and Phylogenetic Studies100%
  • Microbial Community Ecology and Physiology100%
  • Gut microbiota and health100%
Keywords
  • Sandpiper
  • Metagenomics
  • Identification (biology)
  • Biology
  • Zoology
  • Ecology
  • Biochemistry
No related works found for this paper.

Funding

  • NS
    National Science Foundation
    Award: 2022070
  • UD
    U.S. Department of Energy
    Awards: DE-SC0010580, DE-SC0004632, DE-SC0016440
  • G
    Google
  • AW
    Amazon Web Services
  • AR
    Australian Research Council
    Award: FT210100521