Whole genome sequencing and annotations of Trametes sanguinea ZHSJ
Jinan Institute of Quantum Technology · Institute of Agro-Products Processing Science and Technology · +2 more institutions
Abstract
Trametes sanguinea belongs to the polyporaceae family and its fruiting body possesses several benefits. In the current study, Trametes sanguinea ZHSJ (T. sanguinea ZHSJ) isolated from the chestnut tree wood was studied for its whole genome sequence and transcriptome sequence with their annotations. T. sanguinea ZHSJ genome is 41.3243 Mb in length with a total of 135 contigs with N50 contig length 2.8138 Mb. A total of 10886 genes of T. sanguinea ZHSJ were annotated. Further, RNA sequencing and assembly represented 11861 genes, out of these 10,507 genes were annotated with four annotation databases. Moreover, denovo prediction annotation performed by Funannotate represented 12,268 coding genes and simple…
Citation impact
- FWCI
- 90.77
- Percentile
- 100%
- References
- 41
Authors
9- RSRathna Silviya LodiCorresponding
Jinan Institute of Quantum Technology, Institute of Agro-Products Processing Science and Technology, Ministry of Agriculture
- XJXiuwen Jia
Institute of Agro-Products Processing Science and Technology, Ministry of Agriculture
- PYPeng Yang
Ministry of Agriculture
- CPChune Peng
Institute of Agro-Products Processing Science and Technology, Ministry of Agriculture
- XDXiaodan Dong
Institute of Agro-Products Processing Science and Technology, Ministry of Agriculture
Topics & keywords
- Biology
- Genome
- Computational biology
- DNA sequencing
- Whole genome sequencing
- Evolutionary biology
- Genetics
- Gene
- Zero hunger