articleJournal of Structural BiologySep 19, 2012HYBRID OA

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

MRC Laboratory of Molecular Biology

PubMed
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Abstract

RELION, for REgularized LIkelihood OptimizatioN, is an open-source computer program for the refinement of macromolecular structures by single-particle analysis of electron cryo-microscopy (cryo-EM) data. Whereas alternative approaches often rely on user expertise for the tuning of parameters, RELION uses a Bayesian approach to infer parameters of a statistical model from the data. This paper describes developments that reduce the computational costs of the underlying maximum a posteriori (MAP) algorithm, as well as statistical considerations that yield new insights into the accuracy with which the relative orientations of individual particles may be determined. A so-called gold-standard Fourier shell…

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Topics & keywords

Keywords
  • Overfitting
  • Computer science
  • Bayesian probability
  • Statistical model
  • A priori and a posteriori
  • Bayesian optimization
  • Maximum a posteriori estimation
  • Data mining
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